STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOW08304.1DDE transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)    
Predicted Functional Partners:
AOW08303.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.947
AOW08078.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.775
AOW11317.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.775
AOW11352.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.775
AOW11362.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.775
EM308_11585
DDE transposase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.775
EM308_12360
DDE transposase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.775
AOW10235.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.775
Your Current Organism:
Flavobacterium gilvum
NCBI taxonomy Id: 1492737
Other names: F. gilvum, Flavobacterium gilvum Shin et al. 2017, Flavobacterium sp. EM1308, JCM 30144, KACC 18113, strain EM1308
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