Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Current Organism:
Flavobacterium gilvum
NCBI taxonomy Id: 1492737
Other names: F. gilvum, Flavobacterium gilvum Shin et al. 2017, Flavobacterium sp. EM1308, JCM 30144, KACC 18113, strain EM1308
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.