STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANE49150.1Glycan metabolism protein RagB; Derived by automated computational analysis using gene prediction method: Protein Homology. (610 aa)    
Predicted Functional Partners:
ANE49151.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.955
ANE51866.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.823
ANE53646.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.749
ANE51411.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.710
ANE52103.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.604
ANE52104.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.593
ANE50501.1
Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.569
ANE49793.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.559
ANE52102.1
Glycan metabolism protein RagB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.555
ANE50524.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.545
Your Current Organism:
Flavisolibacter tropicus
NCBI taxonomy Id: 1492898
Other names: F. tropicus, Flavisolibacter sp. LCS9, Flavisolibacter tropicus Lee et al. 2016, JCM 19972, KCTC 42070, strain LCS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.