STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANE53244.1Trehalose phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (748 aa)    
Predicted Functional Partners:
ANE52975.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.995
ANE49293.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.981
ANE49181.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.970
ANE53623.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.969
ANE53159.1
Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.952
glgC
Glucose-1-phosphate adenylyltransferase; Catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.864
ANE51430.1
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.807
ANE52188.1
Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.802
ANE52967.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.800
ANE51537.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
   
  
 0.791
Your Current Organism:
Flavisolibacter tropicus
NCBI taxonomy Id: 1492898
Other names: F. tropicus, Flavisolibacter sp. LCS9, Flavisolibacter tropicus Lee et al. 2016, JCM 19972, KCTC 42070, strain LCS9
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