STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANE49567.1Ornithine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)    
Predicted Functional Partners:
ANE52687.1
General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.
  
  
 0.820
ANE50670.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.780
ANE51192.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.780
ANE49568.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.645
ANE49570.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.641
ANE49569.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.607
ANE53244.1
Trehalose phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.597
ANE52975.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.597
ANE49340.1
1-pyrroline-5-carboxylate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
   
 
  0.506
ANE49295.1
Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.
     
  0.499
Your Current Organism:
Flavisolibacter tropicus
NCBI taxonomy Id: 1492898
Other names: F. tropicus, Flavisolibacter sp. LCS9, Flavisolibacter tropicus Lee et al. 2016, JCM 19972, KCTC 42070, strain LCS9
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.