STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANE49708.1Altronate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (543 aa)    
Predicted Functional Partners:
ANE49709.1
Altronate oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
ANE49706.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.962
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 
 0.944
uxaC
Glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.924
ANE49724.1
Catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.922
ANE53485.1
Altronate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.901
ANE49711.1
Glucuronyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.827
ANE49705.1
Ketohydroxyglutarate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.820
ANE49710.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.819
ANE51176.1
Ribose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.803
Your Current Organism:
Flavisolibacter tropicus
NCBI taxonomy Id: 1492898
Other names: F. tropicus, Flavisolibacter sp. LCS9, Flavisolibacter tropicus Lee et al. 2016, JCM 19972, KCTC 42070, strain LCS9
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