STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANE50093.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)    
Predicted Functional Partners:
ANE50095.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.936
ANE50094.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.837
ANE53344.1
Molecular chaperone GroES; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.781
ANE50096.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.648
ANE50091.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.545
ANE50092.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.505
ANE50097.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.463
Your Current Organism:
Flavisolibacter tropicus
NCBI taxonomy Id: 1492898
Other names: F. tropicus, Flavisolibacter sp. LCS9, Flavisolibacter tropicus Lee et al. 2016, JCM 19972, KCTC 42070, strain LCS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.