STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANE52552.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (885 aa)    
Predicted Functional Partners:
ANE53629.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.645
ANE52551.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.549
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
       0.520
ANE49616.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.498
ANE50600.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.442
ANE50301.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.415
Your Current Organism:
Flavisolibacter tropicus
NCBI taxonomy Id: 1492898
Other names: F. tropicus, Flavisolibacter sp. LCS9, Flavisolibacter tropicus Lee et al. 2016, JCM 19972, KCTC 42070, strain LCS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.