STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANE52597.1Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)    
Predicted Functional Partners:
ANE49511.1
Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.
 
  
 0.582
ANE52570.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.579
ANE52208.1
Peptidoglycan glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.571
ANE50188.1
Peptidoglycan glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.508
tatA
Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
  
 0.505
ANE53669.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.492
ANE53097.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.490
ANE53480.1
Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.462
ANE51777.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.434
ANE51101.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
 0.423
Your Current Organism:
Flavisolibacter tropicus
NCBI taxonomy Id: 1492898
Other names: F. tropicus, Flavisolibacter sp. LCS9, Flavisolibacter tropicus Lee et al. 2016, JCM 19972, KCTC 42070, strain LCS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.