STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GY26_18175Copper resistance protein CopB; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)    
Predicted Functional Partners:
GY26_18170
Copper resistance protein CopA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.992
GY26_18165
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.944
GY26_02345
Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.899
copA
Copper-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.552
GY26_02395
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.473
GY26_18155
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.431
GY26_18160
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.413
Your Current Organism:
Gammaproteobacteria bacterium MFB021
NCBI taxonomy Id: 1492922
Other names: G. bacterium MFB021, bacterium MFB021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.