Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDK83337.1 | SDK83354.1 | SAMN05216497_101157 | SAMN05216497_101158 | Lysophospholipase L1. | Uncharacterized membrane protein. | 0.469 |
SDK83354.1 | SDK83337.1 | SAMN05216497_101158 | SAMN05216497_101157 | Uncharacterized membrane protein. | Lysophospholipase L1. | 0.469 |
SDK83354.1 | SDK83358.1 | SAMN05216497_101158 | SAMN05216497_101159 | Uncharacterized membrane protein. | L-aminopeptidase/D-esterase. | 0.738 |
SDK83354.1 | SDK85771.1 | SAMN05216497_101158 | SAMN05216497_101285 | Uncharacterized membrane protein. | Cobalt/nickel transport system permease protein. | 0.725 |
SDK83354.1 | SDL15461.1 | SAMN05216497_101158 | SAMN05216497_10957 | Uncharacterized membrane protein. | Energy-coupling factor transport system permease protein. | 0.785 |
SDK83354.1 | SDL27004.1 | SAMN05216497_101158 | SAMN05216497_11524 | Uncharacterized membrane protein. | Thiamine transporter. | 0.498 |
SDK83354.1 | birA | SAMN05216497_101158 | SAMN05216497_101189 | Uncharacterized membrane protein. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.468 |
SDK83354.1 | ecfA | SAMN05216497_101158 | SAMN05216497_1135 | Uncharacterized membrane protein. | Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.811 |
SDK83354.1 | ecfA1 | SAMN05216497_101158 | SAMN05216497_1136 | Uncharacterized membrane protein. | Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.788 |
SDK83354.1 | ecfT | SAMN05216497_101158 | SAMN05216497_1134 | Uncharacterized membrane protein. | Energy-coupling factor transport system permease protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.818 |
SDK83354.1 | ribU | SAMN05216497_101158 | SAMN05216497_11115 | Uncharacterized membrane protein. | Riboflavin transporter FmnP; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family. | 0.500 |
SDK83358.1 | SDK83354.1 | SAMN05216497_101159 | SAMN05216497_101158 | L-aminopeptidase/D-esterase. | Uncharacterized membrane protein. | 0.738 |
SDK83358.1 | birA | SAMN05216497_101159 | SAMN05216497_101189 | L-aminopeptidase/D-esterase. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.467 |
SDK85771.1 | SDK83354.1 | SAMN05216497_101285 | SAMN05216497_101158 | Cobalt/nickel transport system permease protein. | Uncharacterized membrane protein. | 0.725 |
SDK85771.1 | birA | SAMN05216497_101285 | SAMN05216497_101189 | Cobalt/nickel transport system permease protein. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.451 |
SDK85771.1 | ecfA | SAMN05216497_101285 | SAMN05216497_1135 | Cobalt/nickel transport system permease protein. | Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.972 |
SDK85771.1 | ecfA1 | SAMN05216497_101285 | SAMN05216497_1136 | Cobalt/nickel transport system permease protein. | Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.972 |
SDL15461.1 | SDK83354.1 | SAMN05216497_10957 | SAMN05216497_101158 | Energy-coupling factor transport system permease protein. | Uncharacterized membrane protein. | 0.785 |
SDL15461.1 | birA | SAMN05216497_10957 | SAMN05216497_101189 | Energy-coupling factor transport system permease protein. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.451 |
SDL15461.1 | ecfA | SAMN05216497_10957 | SAMN05216497_1135 | Energy-coupling factor transport system permease protein. | Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.982 |
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