STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltP_3Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (414 aa)    
Predicted Functional Partners:
SDK84415.1
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
 
     0.775
SDK84386.1
Aspartate ammonia-lyase.
  
  
 0.622
citT
Transcriptional regulatory protein; Two-component system, CitB family, response regulator MalR/two-component system, CitB family, response regulator DctR.
 
   
 0.529
SDK84468.1
Two-component system, CitB family, sensor histidine kinase DctS.
 
   
 0.517
ptsG
PTS system, glucose-specific IIABC component; PTS system D-glucosamine-specific IIA component, Glc family /PTS system D-glucosamine-specific IIB component, Glc family /PTS system D-glucosamine-specific IIC component, Glc family.
     
 0.476
kinE
His Kinase A (phospho-acceptor) domain-containing protein.
     
 0.456
patB
Cystathione beta-lyase.
     
 0.448
SDL34805.1
N-acetylmuramoyl-L-alanine amidase.
    
  0.405
Your Current Organism:
Clostridium cochlearium
NCBI taxonomy Id: 1494
Other names: ATCC 17787, BCRC 14471, Bacillus cochlearius, C. cochlearium, CCRC 14471, CCRC:14471, CCUG 31665, CIP 104319, Clostridium cochlearum, Clostridium lentoputrescens, NCCB 73036, NCIMB 10633, NCTC 13027
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.