Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDK85456.1 | SDK85473.1 | SAMN05216497_101270 | SAMN05216497_101271 | precorrin-6A reductase. | Cobalt-precorrin 3 C17-methyltransferase. | 0.999 |
SDK85456.1 | SDK85494.1 | SAMN05216497_101270 | SAMN05216497_101272 | precorrin-6A reductase. | Cobalt-precorrin 5A acetaldehyde-lyase. | 0.997 |
SDK85456.1 | SDK85515.1 | SAMN05216497_101270 | SAMN05216497_101273 | precorrin-6A reductase. | Cobalt-precorrin 4 C11-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.998 |
SDK85456.1 | SDK85550.1 | SAMN05216497_101270 | SAMN05216497_101275 | precorrin-6A reductase. | precorrin-6Y C5,15-methyltransferase (decarboxylating). | 0.999 |
SDK85456.1 | SDK85593.1 | SAMN05216497_101270 | SAMN05216497_101277 | precorrin-6A reductase. | precorrin-8X methylmutase /cobalt-precorrin 8 methylmutase. | 0.998 |
SDK85456.1 | SDK85699.1 | SAMN05216497_101270 | SAMN05216497_101281 | precorrin-6A reductase. | uroporphyrinogen-III synthase. | 0.980 |
SDK85456.1 | cbiD | SAMN05216497_101270 | SAMN05216497_101276 | precorrin-6A reductase. | Cobalt-precorrin 5B C1-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | 0.998 |
SDK85456.1 | cbiL | SAMN05216497_101270 | SAMN05216497_101274 | precorrin-6A reductase. | Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase; Methylates cobalt-precorrin-2 at the C-20 position to produce cobalt-precorrin-3A in the anaerobic cobalamin biosynthesis pathway. | 0.998 |
SDK85456.1 | cbiP | SAMN05216497_101270 | SAMN05216497_101290 | precorrin-6A reductase. | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.988 |
SDK85456.1 | cobS | SAMN05216497_101270 | SAMN05216497_101293 | precorrin-6A reductase. | Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.916 |
SDK85473.1 | SDK85456.1 | SAMN05216497_101271 | SAMN05216497_101270 | Cobalt-precorrin 3 C17-methyltransferase. | precorrin-6A reductase. | 0.999 |
SDK85473.1 | SDK85494.1 | SAMN05216497_101271 | SAMN05216497_101272 | Cobalt-precorrin 3 C17-methyltransferase. | Cobalt-precorrin 5A acetaldehyde-lyase. | 0.999 |
SDK85473.1 | SDK85515.1 | SAMN05216497_101271 | SAMN05216497_101273 | Cobalt-precorrin 3 C17-methyltransferase. | Cobalt-precorrin 4 C11-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.999 |
SDK85473.1 | SDK85550.1 | SAMN05216497_101271 | SAMN05216497_101275 | Cobalt-precorrin 3 C17-methyltransferase. | precorrin-6Y C5,15-methyltransferase (decarboxylating). | 0.997 |
SDK85473.1 | SDK85593.1 | SAMN05216497_101271 | SAMN05216497_101277 | Cobalt-precorrin 3 C17-methyltransferase. | precorrin-8X methylmutase /cobalt-precorrin 8 methylmutase. | 0.999 |
SDK85473.1 | SDK85699.1 | SAMN05216497_101271 | SAMN05216497_101281 | Cobalt-precorrin 3 C17-methyltransferase. | uroporphyrinogen-III synthase. | 0.986 |
SDK85473.1 | cbiD | SAMN05216497_101271 | SAMN05216497_101276 | Cobalt-precorrin 3 C17-methyltransferase. | Cobalt-precorrin 5B C1-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | 0.994 |
SDK85473.1 | cbiL | SAMN05216497_101271 | SAMN05216497_101274 | Cobalt-precorrin 3 C17-methyltransferase. | Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase; Methylates cobalt-precorrin-2 at the C-20 position to produce cobalt-precorrin-3A in the anaerobic cobalamin biosynthesis pathway. | 0.999 |
SDK85473.1 | cbiP | SAMN05216497_101271 | SAMN05216497_101290 | Cobalt-precorrin 3 C17-methyltransferase. | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.997 |
SDK85473.1 | cobS | SAMN05216497_101271 | SAMN05216497_101293 | Cobalt-precorrin 3 C17-methyltransferase. | Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.986 |
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