Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDK96227.1 | SDK96285.1 | SAMN05216497_10390 | SAMN05216497_10392 | Ribonuclease G. | Hypothetical protein. | 0.719 |
SDK96227.1 | SDK96329.1 | SAMN05216497_10390 | SAMN05216497_10394 | Ribonuclease G. | Sensor_kinase_SpoOB-type, alpha-helical domain. | 0.468 |
SDK96227.1 | SDK96364.1 | SAMN05216497_10390 | SAMN05216497_10396 | Ribonuclease G. | RNA-binding protein. | 0.692 |
SDK96227.1 | SDK96400.1 | SAMN05216497_10390 | SAMN05216497_10398 | Ribonuclease G. | Putative HD superfamily hydrolase of NAD metabolism. | 0.614 |
SDK96227.1 | lytR | SAMN05216497_10390 | SAMN05216497_10399 | Ribonuclease G. | Transcriptional attenuator, LytR family. | 0.563 |
SDK96227.1 | nadD | SAMN05216497_10390 | SAMN05216497_10397 | Ribonuclease G. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.621 |
SDK96227.1 | obg | SAMN05216497_10390 | SAMN05216497_10395 | Ribonuclease G. | GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.647 |
SDK96227.1 | rplU | SAMN05216497_10390 | SAMN05216497_10391 | Ribonuclease G. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.736 |
SDK96227.1 | rpmA | SAMN05216497_10390 | SAMN05216497_10393 | Ribonuclease G. | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. | 0.742 |
SDK96285.1 | SDK96227.1 | SAMN05216497_10392 | SAMN05216497_10390 | Hypothetical protein. | Ribonuclease G. | 0.719 |
SDK96285.1 | SDK96329.1 | SAMN05216497_10392 | SAMN05216497_10394 | Hypothetical protein. | Sensor_kinase_SpoOB-type, alpha-helical domain. | 0.689 |
SDK96285.1 | SDK96364.1 | SAMN05216497_10392 | SAMN05216497_10396 | Hypothetical protein. | RNA-binding protein. | 0.723 |
SDK96285.1 | SDK96400.1 | SAMN05216497_10392 | SAMN05216497_10398 | Hypothetical protein. | Putative HD superfamily hydrolase of NAD metabolism. | 0.699 |
SDK96285.1 | lytR | SAMN05216497_10392 | SAMN05216497_10399 | Hypothetical protein. | Transcriptional attenuator, LytR family. | 0.644 |
SDK96285.1 | nadD | SAMN05216497_10392 | SAMN05216497_10397 | Hypothetical protein. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.663 |
SDK96285.1 | obg | SAMN05216497_10392 | SAMN05216497_10395 | Hypothetical protein. | GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.709 |
SDK96285.1 | rplU | SAMN05216497_10392 | SAMN05216497_10391 | Hypothetical protein. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.990 |
SDK96285.1 | rpmA | SAMN05216497_10392 | SAMN05216497_10393 | Hypothetical protein. | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. | 0.997 |
SDK96329.1 | SDK96227.1 | SAMN05216497_10394 | SAMN05216497_10390 | Sensor_kinase_SpoOB-type, alpha-helical domain. | Ribonuclease G. | 0.468 |
SDK96329.1 | SDK96285.1 | SAMN05216497_10394 | SAMN05216497_10392 | Sensor_kinase_SpoOB-type, alpha-helical domain. | Hypothetical protein. | 0.689 |
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