Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDK90235.1 | SDK96624.1 | SAMN05216497_10293 | SAMN05216497_103110 | Leader peptidase (prepilin peptidase) / N-methyltransferase. | Competence protein ComEC. | 0.526 |
SDK90235.1 | SDK99958.1 | SAMN05216497_10293 | SAMN05216497_10463 | Leader peptidase (prepilin peptidase) / N-methyltransferase. | DNA processing protein. | 0.763 |
SDK96624.1 | SDK90235.1 | SAMN05216497_103110 | SAMN05216497_10293 | Competence protein ComEC. | Leader peptidase (prepilin peptidase) / N-methyltransferase. | 0.526 |
SDK96624.1 | SDK99923.1 | SAMN05216497_103110 | SAMN05216497_10461 | Competence protein ComEC. | Putative endonuclease; Belongs to the UPF0102 family. | 0.403 |
SDK96624.1 | SDK99946.1 | SAMN05216497_103110 | SAMN05216497_10462 | Competence protein ComEC. | Magnesium chelatase family protein. | 0.687 |
SDK96624.1 | SDK99958.1 | SAMN05216497_103110 | SAMN05216497_10463 | Competence protein ComEC. | DNA processing protein. | 0.761 |
SDK96624.1 | SDL15279.1 | SAMN05216497_103110 | SAMN05216497_10947 | Competence protein ComEC. | Magnesium chelatase family protein. | 0.696 |
SDK96624.1 | SDL18572.1 | SAMN05216497_103110 | SAMN05216497_11123 | Competence protein ComEC. | Competence protein ComFC. | 0.840 |
SDK96624.1 | fliP | SAMN05216497_103110 | SAMN05216497_10624 | Competence protein ComEC. | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. | 0.463 |
SDK99923.1 | SDK96624.1 | SAMN05216497_10461 | SAMN05216497_103110 | Putative endonuclease; Belongs to the UPF0102 family. | Competence protein ComEC. | 0.403 |
SDK99923.1 | SDK99946.1 | SAMN05216497_10461 | SAMN05216497_10462 | Putative endonuclease; Belongs to the UPF0102 family. | Magnesium chelatase family protein. | 0.851 |
SDK99923.1 | SDK99958.1 | SAMN05216497_10461 | SAMN05216497_10463 | Putative endonuclease; Belongs to the UPF0102 family. | DNA processing protein. | 0.851 |
SDK99923.1 | SDL15279.1 | SAMN05216497_10461 | SAMN05216497_10947 | Putative endonuclease; Belongs to the UPF0102 family. | Magnesium chelatase family protein. | 0.717 |
SDK99923.1 | SDL18572.1 | SAMN05216497_10461 | SAMN05216497_11123 | Putative endonuclease; Belongs to the UPF0102 family. | Competence protein ComFC. | 0.643 |
SDK99923.1 | codY | SAMN05216497_10461 | SAMN05216497_10465 | Putative endonuclease; Belongs to the UPF0102 family. | Transcriptional pleiotropic repressor; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. | 0.523 |
SDK99923.1 | topA | SAMN05216497_10461 | SAMN05216497_10464 | Putative endonuclease; Belongs to the UPF0102 family. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.642 |
SDK99946.1 | SDK96624.1 | SAMN05216497_10462 | SAMN05216497_103110 | Magnesium chelatase family protein. | Competence protein ComEC. | 0.687 |
SDK99946.1 | SDK99923.1 | SAMN05216497_10462 | SAMN05216497_10461 | Magnesium chelatase family protein. | Putative endonuclease; Belongs to the UPF0102 family. | 0.851 |
SDK99946.1 | SDK99958.1 | SAMN05216497_10462 | SAMN05216497_10463 | Magnesium chelatase family protein. | DNA processing protein. | 0.954 |
SDK99946.1 | SDL18572.1 | SAMN05216497_10462 | SAMN05216497_11123 | Magnesium chelatase family protein. | Competence protein ComFC. | 0.746 |
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