Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDK97783.1 | guaA | SAMN05216497_103173 | SAMN05216497_102106 | Thymidine phosphorylase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.652 |
SDK97783.1 | punA | SAMN05216497_103173 | SAMN05216497_106122 | Thymidine phosphorylase. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.933 |
SDK97783.1 | pyrE | SAMN05216497_103173 | SAMN05216497_102146 | Thymidine phosphorylase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.580 |
SDK97783.1 | pyrR | SAMN05216497_103173 | SAMN05216497_10670 | Thymidine phosphorylase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.865 |
SDK97783.1 | udk_1 | SAMN05216497_103173 | SAMN05216497_10123 | Thymidine phosphorylase. | Uridine kinase. | 0.870 |
SDK97783.1 | udk_1-2 | SAMN05216497_103173 | SAMN05216497_1413 | Thymidine phosphorylase. | Uridine kinase. | 0.866 |
SDK97783.1 | upp | SAMN05216497_103173 | SAMN05216497_11144 | Thymidine phosphorylase. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.927 |
guaA | SDK97783.1 | SAMN05216497_102106 | SAMN05216497_103173 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Thymidine phosphorylase. | 0.652 |
guaA | punA | SAMN05216497_102106 | SAMN05216497_106122 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.746 |
guaA | pyrE | SAMN05216497_102106 | SAMN05216497_102146 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.950 |
guaA | pyrF | SAMN05216497_102106 | SAMN05216497_102143 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.782 |
guaA | pyrH | SAMN05216497_102106 | SAMN05216497_10468 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.900 |
guaA | pyrR | SAMN05216497_102106 | SAMN05216497_10670 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.626 |
guaA | rpiB | SAMN05216497_102106 | SAMN05216497_11145 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Ribose-5-phosphate isomerase. | 0.436 |
guaA | udk_1 | SAMN05216497_102106 | SAMN05216497_10123 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Uridine kinase. | 0.436 |
guaA | udk_1-2 | SAMN05216497_102106 | SAMN05216497_1413 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Uridine kinase. | 0.926 |
guaA | upp | SAMN05216497_102106 | SAMN05216497_11144 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.963 |
punA | SDK97783.1 | SAMN05216497_106122 | SAMN05216497_103173 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Thymidine phosphorylase. | 0.933 |
punA | guaA | SAMN05216497_106122 | SAMN05216497_102106 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.746 |
punA | rpiB | SAMN05216497_106122 | SAMN05216497_11145 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Ribose-5-phosphate isomerase. | 0.479 |
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