Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL19304.1 | SDL19410.1 | SAMN05216497_11163 | SAMN05216497_11166 | Stage II sporulation protein R. | Spore germination protein. | 0.862 |
SDL19304.1 | SDL19426.1 | SAMN05216497_11163 | SAMN05216497_11167 | Stage II sporulation protein R. | Hypothetical protein. | 0.493 |
SDL19304.1 | gerBC_1 | SAMN05216497_11163 | SAMN05216497_11164 | Stage II sporulation protein R. | Spore germination protein. | 0.794 |
SDL19304.1 | ipk | SAMN05216497_11163 | SAMN05216497_11168 | Stage II sporulation protein R. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.589 |
SDL19304.1 | yndE_1 | SAMN05216497_11163 | SAMN05216497_11165 | Stage II sporulation protein R. | Spore germination protein AB. | 0.804 |
SDL19410.1 | SDL19304.1 | SAMN05216497_11166 | SAMN05216497_11163 | Spore germination protein. | Stage II sporulation protein R. | 0.862 |
SDL19410.1 | SDL19426.1 | SAMN05216497_11166 | SAMN05216497_11167 | Spore germination protein. | Hypothetical protein. | 0.746 |
SDL19410.1 | gerBC_1 | SAMN05216497_11166 | SAMN05216497_11164 | Spore germination protein. | Spore germination protein. | 0.939 |
SDL19410.1 | ipk | SAMN05216497_11166 | SAMN05216497_11168 | Spore germination protein. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.530 |
SDL19410.1 | yndE_1 | SAMN05216497_11166 | SAMN05216497_11165 | Spore germination protein. | Spore germination protein AB. | 0.939 |
SDL19426.1 | SDL19304.1 | SAMN05216497_11167 | SAMN05216497_11163 | Hypothetical protein. | Stage II sporulation protein R. | 0.493 |
SDL19426.1 | SDL19410.1 | SAMN05216497_11167 | SAMN05216497_11166 | Hypothetical protein. | Spore germination protein. | 0.746 |
SDL19426.1 | gerBC_1 | SAMN05216497_11167 | SAMN05216497_11164 | Hypothetical protein. | Spore germination protein. | 0.677 |
SDL19426.1 | ipk | SAMN05216497_11167 | SAMN05216497_11168 | Hypothetical protein. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.518 |
SDL19426.1 | yndE_1 | SAMN05216497_11167 | SAMN05216497_11165 | Hypothetical protein. | Spore germination protein AB. | 0.677 |
gerBC_1 | SDL19304.1 | SAMN05216497_11164 | SAMN05216497_11163 | Spore germination protein. | Stage II sporulation protein R. | 0.794 |
gerBC_1 | SDL19410.1 | SAMN05216497_11164 | SAMN05216497_11166 | Spore germination protein. | Spore germination protein. | 0.939 |
gerBC_1 | SDL19426.1 | SAMN05216497_11164 | SAMN05216497_11167 | Spore germination protein. | Hypothetical protein. | 0.677 |
gerBC_1 | ipk | SAMN05216497_11164 | SAMN05216497_11168 | Spore germination protein. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.658 |
gerBC_1 | yndE_1 | SAMN05216497_11164 | SAMN05216497_11165 | Spore germination protein. | Spore germination protein AB. | 0.971 |
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