Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL21341.1 | SDL21368.1 | SAMN05216497_11250 | SAMN05216497_11251 | Hypothetical protein. | Magnesium transporter; Acts as a magnesium transporter. | 0.457 |
SDL21341.1 | metN | SAMN05216497_11250 | SAMN05216497_11247 | Hypothetical protein. | D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.516 |
SDL21341.1 | metP | SAMN05216497_11250 | SAMN05216497_11248 | Hypothetical protein. | D-methionine transport system permease protein. | 0.527 |
SDL21341.1 | metQ | SAMN05216497_11250 | SAMN05216497_11249 | Hypothetical protein. | D-methionine transport system substrate-binding protein; Belongs to the nlpA lipoprotein family. | 0.557 |
SDL21368.1 | SDL21341.1 | SAMN05216497_11251 | SAMN05216497_11250 | Magnesium transporter; Acts as a magnesium transporter. | Hypothetical protein. | 0.457 |
SDL21368.1 | metP | SAMN05216497_11251 | SAMN05216497_11248 | Magnesium transporter; Acts as a magnesium transporter. | D-methionine transport system permease protein. | 0.413 |
metN | SDL21341.1 | SAMN05216497_11247 | SAMN05216497_11250 | D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | Hypothetical protein. | 0.516 |
metN | metP | SAMN05216497_11247 | SAMN05216497_11248 | D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | D-methionine transport system permease protein. | 0.999 |
metN | metQ | SAMN05216497_11247 | SAMN05216497_11249 | D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | D-methionine transport system substrate-binding protein; Belongs to the nlpA lipoprotein family. | 0.999 |
metP | SDL21341.1 | SAMN05216497_11248 | SAMN05216497_11250 | D-methionine transport system permease protein. | Hypothetical protein. | 0.527 |
metP | SDL21368.1 | SAMN05216497_11248 | SAMN05216497_11251 | D-methionine transport system permease protein. | Magnesium transporter; Acts as a magnesium transporter. | 0.413 |
metP | metN | SAMN05216497_11248 | SAMN05216497_11247 | D-methionine transport system permease protein. | D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.999 |
metP | metQ | SAMN05216497_11248 | SAMN05216497_11249 | D-methionine transport system permease protein. | D-methionine transport system substrate-binding protein; Belongs to the nlpA lipoprotein family. | 0.999 |
metQ | SDL21341.1 | SAMN05216497_11249 | SAMN05216497_11250 | D-methionine transport system substrate-binding protein; Belongs to the nlpA lipoprotein family. | Hypothetical protein. | 0.557 |
metQ | metN | SAMN05216497_11249 | SAMN05216497_11247 | D-methionine transport system substrate-binding protein; Belongs to the nlpA lipoprotein family. | D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.999 |
metQ | metP | SAMN05216497_11249 | SAMN05216497_11248 | D-methionine transport system substrate-binding protein; Belongs to the nlpA lipoprotein family. | D-methionine transport system permease protein. | 0.999 |