STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL25107.1H+/Cl-antiporter ClcA. (442 aa)    
Predicted Functional Partners:
SDK98038.1
Alanine or glycine:cation symporter, AGCS family.
   
    0.530
SDL09903.1
Alanine or glycine:cation symporter, AGCS family.
   
    0.530
alsT
Alanine or glycine:cation symporter, AGCS family.
   
    0.530
SDL25120.1
Phage holin family Hol44, holin superfamily V.
       0.476
nnrE
NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]
       0.467
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
       0.464
SDL29129.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.419
SDL38301.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.410
SDL06597.1
Manganese-dependent inorganic pyrophosphatase.
       0.405
Your Current Organism:
Clostridium cochlearium
NCBI taxonomy Id: 1494
Other names: ATCC 17787, BCRC 14471, Bacillus cochlearius, C. cochlearium, CCRC 14471, CCRC:14471, CCUG 31665, CIP 104319, Clostridium cochlearum, Clostridium lentoputrescens, NCCB 73036, NCIMB 10633, NCTC 13027
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