Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ART_2202 | ART_2730 | Cell wall-binding protein; COG1652. | Hypothetical protein; COG0791. | 0.430 |
ART_2729 | ART_2730 | Hypothetical protein. | Hypothetical protein; COG0791. | 0.580 |
ART_2730 | ART_2202 | Hypothetical protein; COG0791. | Cell wall-binding protein; COG1652. | 0.430 |
ART_2730 | ART_2729 | Hypothetical protein; COG0791. | Hypothetical protein. | 0.580 |
ART_2730 | ART_2731 | Hypothetical protein; COG0791. | Two-component system response regulator; COG2197. | 0.508 |
ART_2730 | ART_2732 | Hypothetical protein; COG0791. | Putative two-component histidine kinase; COG4585. | 0.501 |
ART_2730 | ART_3991 | Hypothetical protein; COG0791. | Hypothetical protein; COG3583. | 0.449 |
ART_2731 | ART_2730 | Two-component system response regulator; COG2197. | Hypothetical protein; COG0791. | 0.508 |
ART_2731 | ART_2732 | Two-component system response regulator; COG2197. | Putative two-component histidine kinase; COG4585. | 0.961 |
ART_2732 | ART_2730 | Putative two-component histidine kinase; COG4585. | Hypothetical protein; COG0791. | 0.501 |
ART_2732 | ART_2731 | Putative two-component histidine kinase; COG4585. | Two-component system response regulator; COG2197. | 0.961 |
ART_3991 | ART_2730 | Hypothetical protein; COG3583. | Hypothetical protein; COG0791. | 0.449 |