STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000934725_00355Unannotated protein. (553 aa)    
Predicted Functional Partners:
GCA_000934725_00353
Unannotated protein.
 
 0.968
GCA_000934725_01742
Unannotated protein.
 
 
 0.965
GCA_000934725_02554
Unannotated protein.
 
 0.957
GCA_000934725_00354
Unannotated protein.
 
 
 0.903
GCA_000934725_02551
Unannotated protein.
 
 
 0.833
GCA_000934725_01083
Unannotated protein.
  
 
 0.823
GCA_000934725_02556
Unannotated protein.
 
     0.791
GCA_000934725_00964
Unannotated protein.
 
     0.790
GCA_000934725_00357
Unannotated protein.
 
 
 0.776
GCA_000934725_03037
Unannotated protein.
 
 
 0.766
Your Current Organism:
Methyloterricola oryzae
NCBI taxonomy Id: 1495050
Other names: LMG 29185, LMG:29185, M. oryzae, Methylococcaceae bacterium 73a, Methyloterricola oryzae Frindte et al. 2017, VKM B-2986, strain 73a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.