STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000934725_00446Unannotated protein. (375 aa)    
Predicted Functional Partners:
GCA_000934725_00375
Unannotated protein.
    
 0.954
GCA_000934725_00447
Unannotated protein.
    0.953
GCA_000934725_03923
Unannotated protein.
 
  
 0.944
GCA_000934725_01106
Unannotated protein.
  
 
 0.884
GCA_000934725_01614
Unannotated protein.
  
 
 0.882
GCA_000934725_01782
Unannotated protein.
   
 0.874
GCA_000934725_02927
Unannotated protein.
   
 0.874
GCA_000934725_00445
Unannotated protein.
       0.768
GCA_000934725_02397
Unannotated protein.
   
   0.751
GCA_000934725_02971
Unannotated protein.
    
   0.745
Your Current Organism:
Methyloterricola oryzae
NCBI taxonomy Id: 1495050
Other names: LMG 29185, LMG:29185, M. oryzae, Methylococcaceae bacterium 73a, Methyloterricola oryzae Frindte et al. 2017, VKM B-2986, strain 73a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.