STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000934725_00920Unannotated protein. (318 aa)    
Predicted Functional Partners:
GCA_000934725_00921
Unannotated protein.
 
 
 0.953
GCA_000934725_00919
Unannotated protein.
 
 0.940
GCA_000934725_00928
Unannotated protein.
 
 
 0.917
GCA_000934725_00922
Unannotated protein.
 
 0.900
GCA_000934725_00926
Unannotated protein.
 
 0.866
GCA_000934725_03570
Unannotated protein.
 
  
 0.717
GCA_000934725_00929
Unannotated protein.
  
     0.639
GCA_000934725_00925
Unannotated protein.
 
     0.599
GCA_000934725_00923
Unannotated protein.
 
  
 
0.586
GCA_000934725_04111
Unannotated protein.
  
    0.531
Your Current Organism:
Methyloterricola oryzae
NCBI taxonomy Id: 1495050
Other names: LMG 29185, LMG:29185, M. oryzae, Methylococcaceae bacterium 73a, Methyloterricola oryzae Frindte et al. 2017, VKM B-2986, strain 73a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.