STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000934725_01498Unannotated protein. (135 aa)    
Predicted Functional Partners:
GCA_000934725_01593
Unannotated protein.
   
   0.753
GCA_000934725_01499
Unannotated protein.
   
   0.556
GCA_000934725_01503
Unannotated protein.
   
   0.556
GCA_000934725_00997
Unannotated protein.
 
  
 0.554
GCA_000934725_01500
Unannotated protein.
       0.492
GCA_000934725_01501
Unannotated protein.
       0.492
GCA_000934725_01502
Unannotated protein.
       0.492
GCA_000934725_02439
Unannotated protein.
  
   0.472
Your Current Organism:
Methyloterricola oryzae
NCBI taxonomy Id: 1495050
Other names: LMG 29185, LMG:29185, M. oryzae, Methylococcaceae bacterium 73a, Methyloterricola oryzae Frindte et al. 2017, VKM B-2986, strain 73a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.