STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000934725_03269Unannotated protein. (576 aa)    
Predicted Functional Partners:
GCA_000934725_01083
Unannotated protein.
 
 0.985
GCA_000934725_01806
Unannotated protein.
  
 0.927
GCA_000934725_01112
Unannotated protein.
 
 
 0.902
GCA_000934725_01805
Unannotated protein.
 
 
 0.900
GCA_000934725_04147
Unannotated protein.
  
 
 0.884
GCA_000934725_00227
Unannotated protein.
  
 0.879
GCA_000934725_00352
Unannotated protein.
  
 0.879
GCA_000934725_02141
Unannotated protein.
  
 
 0.879
GCA_000934725_02928
Unannotated protein.
  
 0.879
GCA_000934725_04146
Unannotated protein.
  
 0.876
Your Current Organism:
Methyloterricola oryzae
NCBI taxonomy Id: 1495050
Other names: LMG 29185, LMG:29185, M. oryzae, Methylococcaceae bacterium 73a, Methyloterricola oryzae Frindte et al. 2017, VKM B-2986, strain 73a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.