STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000934725_03499Unannotated protein. (305 aa)    
Predicted Functional Partners:
GCA_000934725_01962
Unannotated protein.
 
  
 0.980
GCA_000934725_01959
Unannotated protein.
 
  
 0.979
GCA_000934725_02696
Unannotated protein.
  
  
 0.977
GCA_000934725_01525
Unannotated protein.
  
  
 0.963
GCA_000934725_03500
Unannotated protein.
 
  
 
0.942
GCA_000934725_00655
Unannotated protein.
  
  
 
0.882
GCA_000934725_03581
Unannotated protein.
 
  
 0.874
GCA_000934725_03328
Unannotated protein.
    
  0.853
GCA_000934725_01963
Unannotated protein.
 
  
  0.823
GCA_000934725_01960
Unannotated protein.
 
     0.792
Your Current Organism:
Methyloterricola oryzae
NCBI taxonomy Id: 1495050
Other names: LMG 29185, LMG:29185, M. oryzae, Methylococcaceae bacterium 73a, Methyloterricola oryzae Frindte et al. 2017, VKM B-2986, strain 73a
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.