STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMH94172.1Ferredoxin. (54 aa)    
Predicted Functional Partners:
AMH94173.1
Ferredoxin.
 
    
0.740
AMH94845.1
Hypothetical protein.
  
  
 0.656
AMH95004.1
Nitrogenase; Belongs to the NifH/BchL/ChlL family.
  
  
 0.654
AMH95216.1
Nitrogenase iron protein NifH2.
  
  
 0.654
AMH94174.1
Hypothetical protein.
       0.491
AMH94175.1
Hypothetical protein.
       0.491
AMH94751.1
Dihydroorotate dehydrogenase electron transfer subunit PyrK.
     
 0.433
Your Current Organism:
methanogenic archaeon ISO4H5
NCBI taxonomy Id: 1495144
Other names: Thermoplasmatales archaeon enrichment culture clone ISO4-H5, m. archaeon ISO4-H5, methanogenic archaeon ISO4-H5, methanogenic archaeon mixed culture ISO4-H5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.