STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMH94210.1Amino acid-binding protein with ACT domain protein. (165 aa)    
Predicted Functional Partners:
hisB
Imidazoleglycerol-phosphate dehydratase HisB.
       0.660
AMH93766.1
Hypothetical protein.
  
     0.656
AMH95526.1
Transcriptional regulator.
  
     0.654
AMH93844.1
Metal-dependent protease.
  
     0.653
AMH95232.1
Hypothetical protein.
  
     0.652
AMH95394.1
Riboflavin kinase ribK.
  
   
 0.647
AMH95466.1
Hypothetical protein.
  
     0.638
AMH94478.1
Phosphoserine phosphatase SerB.
  
     0.636
AMH93839.1
ssDNA exonuclease RecJ1.
  
     0.629
AMH94506.1
Peptidase M50 family (6 TMHs).
  
     0.615
Your Current Organism:
methanogenic archaeon ISO4H5
NCBI taxonomy Id: 1495144
Other names: Thermoplasmatales archaeon enrichment culture clone ISO4-H5, m. archaeon ISO4-H5, methanogenic archaeon ISO4-H5, methanogenic archaeon mixed culture ISO4-H5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.