STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMH94330.1Low molecular weight phosphotyrosine protein phosphatase. (195 aa)    
Predicted Functional Partners:
AMH94345.1
Protein-tyrosine phosphatase.
  
  
 
0.906
AMH94332.1
Threonine synthase ThrC; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
       0.594
hisI
Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase HisI; In the N-terminal section; belongs to the PRA-CH family.
     
 0.587
thrB
Homoserine kinase ThrB; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
     
 0.577
AMH94326.1
ABC transporter permease protein.
       0.552
AMH94327.1
ABC transporter ATP-binding protein.
       0.552
AMH94328.1
Ig-like domain-containing surface protein.
       0.552
AMH94329.1
Hypothetical protein.
       0.552
AMH94476.1
Lipid A export permease/ATP-binding protein MsbA1.
   
 
 0.451
AMH94477.1
Lipid A export permease/ATP-binding protein MsbA2.
   
 
 0.451
Your Current Organism:
methanogenic archaeon ISO4H5
NCBI taxonomy Id: 1495144
Other names: Thermoplasmatales archaeon enrichment culture clone ISO4-H5, m. archaeon ISO4-H5, methanogenic archaeon ISO4-H5, methanogenic archaeon mixed culture ISO4-H5
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