Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMH94548.1 | AMH94550.1 | AR505_0827 | AR505_0829 | Wyosine biosynthesis protein TYW1. | Transmembrane protein. | 0.774 |
AMH94548.1 | AMH94551.1 | AR505_0827 | AR505_0830 | Wyosine biosynthesis protein TYW1. | Amino acid/peptide transporter. | 0.508 |
AMH94548.1 | rfcL | AR505_0827 | AR505_0828 | Wyosine biosynthesis protein TYW1. | Replication factor C large subunit RfcL; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcL subfamily. | 0.813 |
AMH94550.1 | AMH94548.1 | AR505_0829 | AR505_0827 | Transmembrane protein. | Wyosine biosynthesis protein TYW1. | 0.774 |
AMH94550.1 | AMH94551.1 | AR505_0829 | AR505_0830 | Transmembrane protein. | Amino acid/peptide transporter. | 0.508 |
AMH94550.1 | rfcL | AR505_0829 | AR505_0828 | Transmembrane protein. | Replication factor C large subunit RfcL; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcL subfamily. | 0.774 |
AMH94551.1 | AMH94548.1 | AR505_0830 | AR505_0827 | Amino acid/peptide transporter. | Wyosine biosynthesis protein TYW1. | 0.508 |
AMH94551.1 | AMH94550.1 | AR505_0830 | AR505_0829 | Amino acid/peptide transporter. | Transmembrane protein. | 0.508 |
AMH94551.1 | rfcL | AR505_0830 | AR505_0828 | Amino acid/peptide transporter. | Replication factor C large subunit RfcL; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcL subfamily. | 0.508 |
rfcL | AMH94548.1 | AR505_0828 | AR505_0827 | Replication factor C large subunit RfcL; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcL subfamily. | Wyosine biosynthesis protein TYW1. | 0.813 |
rfcL | AMH94550.1 | AR505_0828 | AR505_0829 | Replication factor C large subunit RfcL; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcL subfamily. | Transmembrane protein. | 0.774 |
rfcL | AMH94551.1 | AR505_0828 | AR505_0830 | Replication factor C large subunit RfcL; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcL subfamily. | Amino acid/peptide transporter. | 0.508 |