STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMH94558.1Cobalt ABC transporter ATP-binding protein CbiO1; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (385 aa)    
Predicted Functional Partners:
AMH94560.1
Cobalt ABC transporter, permease protein CbiQ.
 
 0.996
cbiM
Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
 
 0.990
AMH94559.1
Cobalt ABC transporter ATP-binding protein CbiO2; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
  
 
0.977
AMH94561.1
Cobalt transport protein CbiN.
 
 
 0.976
AMH94101.1
Precorrin-6x reductase CbiJ.
  
  
 0.958
AMH94557.1
Trigger factor.
  
    0.692
AMH94556.1
Transporter Na+/H+ antiporter family.
     
 0.573
truA
tRNA pseudouridine synthase A TruA; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family.
  
  
 0.546
AMH95107.1
Methyl-coenzyme M reductase component A2 AtwA.
 
 
0.498
AMH95220.1
ABC transporter ATP-binding protein.
 
   
0.498
Your Current Organism:
methanogenic archaeon ISO4H5
NCBI taxonomy Id: 1495144
Other names: Thermoplasmatales archaeon enrichment culture clone ISO4-H5, m. archaeon ISO4-H5, methanogenic archaeon ISO4-H5, methanogenic archaeon mixed culture ISO4-H5
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.