STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMH95109.1Hypothetical protein. (185 aa)    
Predicted Functional Partners:
AMH95108.1
Hypothetical protein.
       0.741
AMH95107.1
Methyl-coenzyme M reductase component A2 AtwA.
       0.498
AMH95105.1
Methanogeneis marker protein 3; Belongs to the UPF0288 family.
       0.464
AMH95100.1
Methanogeneis marker protein 7.
       0.463
AMH95101.1
Methanogeneis marker protein 17.
       0.463
AMH95104.1
Methanogeneis marker protein 6.
       0.463
AMH95103.1
Methanogeneis marker protein 5.
       0.457
AMH95099.1
Hypothetical protein.
       0.454
AMH95102.1
Methanogeneis marker protein 15.
       0.454
AMH95106.1
Methyl-coenzyme M reductase C subunit McrC.
       0.454
Your Current Organism:
methanogenic archaeon ISO4H5
NCBI taxonomy Id: 1495144
Other names: Thermoplasmatales archaeon enrichment culture clone ISO4-H5, m. archaeon ISO4-H5, methanogenic archaeon ISO4-H5, methanogenic archaeon mixed culture ISO4-H5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.