STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMH95466.1Hypothetical protein. (118 aa)    
Predicted Functional Partners:
AMH93859.1
RNA-binding protein.
  
 0.999
rps6e
Ribosomal protein S6e Rps6e; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.858
eif2g
Translation initiation factor aIF-2 gamma subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily.
  
    0.827
AMH95464.1
Transmembrane protein.
 
     0.775
AMH95394.1
Riboflavin kinase ribK.
 
     0.717
rpl7ae
Ribosomal protein L7Ae Rpl7ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.
  
 
 0.709
AMH93746.1
NMD3 family protein.
  
    0.661
AMH95320.1
C/D box methylation guide ribonucleoprotein complex aNOP56 subunit.
   
 
 0.657
AMH95465.1
Transmembrane protein.
       0.651
rpl31e
Ribosomal protein L31e Rpl31e; Belongs to the ribosomal protein L31e family.
  
   0.647
Your Current Organism:
methanogenic archaeon ISO4H5
NCBI taxonomy Id: 1495144
Other names: Thermoplasmatales archaeon enrichment culture clone ISO4-H5, m. archaeon ISO4-H5, methanogenic archaeon ISO4-H5, methanogenic archaeon mixed culture ISO4-H5
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