STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744455_00139Unannotated protein. (381 aa)    
Predicted Functional Partners:
GCA_000744455_02591
Unannotated protein.
  
 0.998
GCA_000744455_01327
Unannotated protein.
     
 0.967
GCA_000744455_02273
Unannotated protein.
    
 
 0.860
GCA_000744455_01403
Unannotated protein.
   
 0.780
GCA_000744455_00137
Unannotated protein.
       0.678
GCA_000744455_00138
Unannotated protein.
       0.678
GCA_000744455_02250
Unannotated protein.
  
   
 0.605
GCA_000744455_01207
Unannotated protein.
      
 0.526
GCA_000744455_00313
Unannotated protein.
   
    0.518
GCA_000744455_01478
Unannotated protein.
   
    0.518
Your Current Organism:
Methanobacterium sp. SMA27
NCBI taxonomy Id: 1495336
Other names: M. sp. SMA-27, Methanobacterium sp. SMA-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.