STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744455_00458Unannotated protein. (395 aa)    
Predicted Functional Partners:
GCA_000744455_02063
Unannotated protein.
 
 
 0.983
GCA_000744455_00532
Unannotated protein.
  
  
 0.962
GCA_000744455_02191
Unannotated protein.
  
 
 0.949
GCA_000744455_00158
Unannotated protein.
  
  
 
0.917
GCA_000744455_00459
Unannotated protein.
  
  
 0.879
GCA_000744455_00670
Unannotated protein.
  
  
 
0.786
GCA_000744455_00867
Unannotated protein.
  
  
 
0.786
GCA_000744455_01135
Unannotated protein.
  
  
 
0.785
GCA_000744455_02129
Unannotated protein.
  
  
 
0.785
GCA_000744455_00237
Unannotated protein.
 
  
 0.555
Your Current Organism:
Methanobacterium sp. SMA27
NCBI taxonomy Id: 1495336
Other names: M. sp. SMA-27, Methanobacterium sp. SMA-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.