STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOY74928.1Nickel ABC transporter, nickel/metallophore periplasmic binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (541 aa)    
Predicted Functional Partners:
AOY74927.1
Nickel ABC transporter permease subunit NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.989
AOY74926.1
Nickel ABC transporter permease subunit NikC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.988
AOY77029.1
Nickel ABC transporter permease subunit NikB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.966
AOY77030.1
Nickel ABC transporter permease subunit NikC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.966
AOY74588.1
Nickel ABC transporter permease subunit NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.964
AOY74924.1
Nickel import ATP-binding protein NikE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 
 0.964
AOY74587.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.961
AOY74925.1
Nickel import ATP-binding protein NikD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 
 0.960
AOY78170.1
Nickel ABC transporter permease subunit NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.948
AOY74585.1
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.905
Your Current Organism:
Clostridium formicaceticum
NCBI taxonomy Id: 1497
Other names: ATCC 27076, C. formicaceticum, Clostridium formicoaceticum, DSM 92
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