STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOY76908.1Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)    
Predicted Functional Partners:
AOY76911.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.939
AOY76909.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.937
AOY76912.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.857
AOY76921.1
Phage tail tape measure protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.826
AOY76906.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.809
AOY76674.1
HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.789
AOY76913.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.781
AOY76910.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
AOY76915.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.733
AOY78355.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.711
Your Current Organism:
Clostridium formicaceticum
NCBI taxonomy Id: 1497
Other names: ATCC 27076, C. formicaceticum, Clostridium formicoaceticum, DSM 92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.