STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxuA-3Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. (356 aa)    
Predicted Functional Partners:
AOY77967.1
Mannitol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
AOY76094.1
Mannitol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.983
uxaC-2
Glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.953
AOY76085.1
2-deoxy-D-gluconate 3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.915
AOY77644.1
2-deoxy-D-gluconate 3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.915
uxuA-2
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
  
  
 
0.903
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
  
  
 
0.900
uxaC
Glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.899
AOY76066.1
2-dehydro-3-deoxygluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.863
AOY76067.1
2-dehydro-3-deoxygluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.
    
 0.836
Your Current Organism:
Clostridium formicaceticum
NCBI taxonomy Id: 1497
Other names: ATCC 27076, C. formicaceticum, Clostridium formicoaceticum, DSM 92
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