STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DO97_01940FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (510 aa)    
Predicted Functional Partners:
DO97_01935
Amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.927
DO97_15650
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.772
DO97_18710
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.772
DO97_21325
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.553
DO97_11405
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.545
DO97_17075
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.527
DO97_17850
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.515
DO97_01945
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.501
DO97_11690
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.484
DO97_20040
Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.481
Your Current Organism:
Neosynechococcus sphagnicola
NCBI taxonomy Id: 1497020
Other names: Chroococcales cyanobacterium sy1, N. sphagnicola sy1, Neosynechococcus sphagnicola sy1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.