STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DO97_09345HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (970 aa)    
Predicted Functional Partners:
DO97_14105
Protein SrpB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.540
DO97_09340
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.506
DO97_14745
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.481
DO97_19670
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.481
DO97_06995
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.460
DO97_07000
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.460
DO97_07005
Hypothetical protein; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily.
   
 
 0.460
DO97_15970
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.406
Your Current Organism:
Neosynechococcus sphagnicola
NCBI taxonomy Id: 1497020
Other names: Chroococcales cyanobacterium sy1, N. sphagnicola sy1, Neosynechococcus sphagnicola sy1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.