STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DO97_10720Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (122 aa)    
Predicted Functional Partners:
DO97_10730
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     0.979
DO97_10710
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
      0.854
DO97_15120
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.753
DO97_10725
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.723
DO97_00665
DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.501
DO97_13625
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.490
rsmI
16S rRNA methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
    0.449
DO97_00700
CRISPR-associated protein Csc1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.436
DO97_00695
CRISPR-associated protein Csc2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.417
DO97_17505
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.411
Your Current Organism:
Neosynechococcus sphagnicola
NCBI taxonomy Id: 1497020
Other names: Chroococcales cyanobacterium sy1, N. sphagnicola sy1, Neosynechococcus sphagnicola sy1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.