STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DO97_10920Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (87 aa)    
Predicted Functional Partners:
DO97_20895
Carbon dioxide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
DO97_00370
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.767
DO97_18335
Carbon dioxide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.765
DO97_21380
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.764
DO97_05010
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.760
ndhO
NAD(P)H-quinone oxidoreductase; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.759
DO97_13945
AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.759
DO97_10325
Nitrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.757
DO97_11065
Nitrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.751
DO97_04655
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.749
Your Current Organism:
Neosynechococcus sphagnicola
NCBI taxonomy Id: 1497020
Other names: Chroococcales cyanobacterium sy1, N. sphagnicola sy1, Neosynechococcus sphagnicola sy1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.