STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DO97_15750Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (568 aa)    
Predicted Functional Partners:
DO97_06050
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.947
DO97_03165
DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.780
DO97_15795
Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.775
DO97_13690
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.647
DO97_19505
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.637
DO97_15545
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.490
DO97_13590
4-vinyl reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.408
DO97_03010
Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
     0.402
Your Current Organism:
Neosynechococcus sphagnicola
NCBI taxonomy Id: 1497020
Other names: Chroococcales cyanobacterium sy1, N. sphagnicola sy1, Neosynechococcus sphagnicola sy1
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