STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EP56_09185Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (609 aa)    
Predicted Functional Partners:
EP56_09190
PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.997
EP56_12875
Biphenyl 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.960
EP56_09180
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.940
EP56_12795
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.938
EP56_09175
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.930
EP56_00510
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.908
EP56_04425
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.903
EP56_06620
PhoB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.888
EP56_15940
Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.874
EP56_13415
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.873
Your Current Organism:
Listeriaceae bacterium FSLA50209
NCBI taxonomy Id: 1497679
Other names: L. bacterium FSL A5-0209, Listeriaceae bacterium FSL A5-0209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.