STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EP56_09225Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)    
Predicted Functional Partners:
EP56_09215
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
EP56_09220
Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.985
EP56_10070
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.957
EP56_10470
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.875
EP56_11055
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.875
EP56_13340
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.875
EP56_14840
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.875
EP56_01085
Hemin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.867
EP56_13770
Hemin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.861
EP56_04615
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.846
Your Current Organism:
Listeriaceae bacterium FSLA50209
NCBI taxonomy Id: 1497679
Other names: L. bacterium FSL A5-0209, Listeriaceae bacterium FSL A5-0209
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.