STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EP56_13415Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)    
Predicted Functional Partners:
EP56_13410
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.994
EP56_14955
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.935
EP56_15935
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.924
EP56_12235
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.922
EP56_06625
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.921
EP56_03410
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.919
EP56_17395
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.919
EP56_01145
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.916
EP56_07370
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.909
EP56_04430
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.907
Your Current Organism:
Listeriaceae bacterium FSLA50209
NCBI taxonomy Id: 1497679
Other names: L. bacterium FSL A5-0209, Listeriaceae bacterium FSL A5-0209
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.