STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EP56_14325Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (554 aa)    
Predicted Functional Partners:
EP56_10650
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.975
EP56_14330
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.973
EP56_14320
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.784
EP56_14655
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.708
EP56_14315
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.701
EP56_07860
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.582
EP56_14190
Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.570
EP56_15995
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.564
glgB
Glycogen branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.563
EP56_12715
Glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.476
Your Current Organism:
Listeriaceae bacterium FSLA50209
NCBI taxonomy Id: 1497679
Other names: L. bacterium FSL A5-0209, Listeriaceae bacterium FSL A5-0209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.