STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EP56_14580Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (175 aa)    
Predicted Functional Partners:
EP56_03270
Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.640
lacD
Tagatose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldolase LacD family.
   
    0.628
EP56_13150
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.628
EP56_14825
Pyruvate oxidase; Catalyzes the formation of acetyl phosphate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.
   
    0.628
EP56_12980
PTS mannose transporter subunit IIC; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.618
EP56_15220
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.612
EP56_12970
PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.599
EP56_00665
Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.587
EP56_14300
Cell division protein FtsZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.553
EP56_15740
General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.483
Your Current Organism:
Listeriaceae bacterium FSLA50209
NCBI taxonomy Id: 1497679
Other names: L. bacterium FSL A5-0209, Listeriaceae bacterium FSL A5-0209
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.