STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EP56_15520Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (103 aa)    
Predicted Functional Partners:
EP56_15515
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.843
EP56_15525
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.767
EP56_10475
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.643
EP56_11455
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.592
EP56_03025
Carbonyl reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.544
EP56_15530
Metallopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.542
EP56_02730
Antibiotic resistance protein VanZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.537
EP56_08860
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.475
EP56_14525
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.475
EP56_05570
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.442
Your Current Organism:
Listeriaceae bacterium FSLA50209
NCBI taxonomy Id: 1497679
Other names: L. bacterium FSL A5-0209, Listeriaceae bacterium FSL A5-0209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.