STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mntHManganese transporter; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. (456 aa)    
Predicted Functional Partners:
EP56_04955
Manganese ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.749
EP56_04950
Manganese ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.668
EP56_04960
Manganese ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.558
EP56_07035
Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.529
EP56_17660
Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.513
EP56_17655
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.489
mntR
Manganese transport transcriptional regulator; Central regulator of manganese homeostasis. Belongs to the DtxR/MntR family.
 
  
 0.469
EP56_12865
Sodium:proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
 
   
 0.440
Your Current Organism:
Listeriaceae bacterium FSLA50209
NCBI taxonomy Id: 1497679
Other names: L. bacterium FSL A5-0209, Listeriaceae bacterium FSL A5-0209
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